Optimizing Augustus

Thorough guide for optimizing Augustus on well-suited BUSCO genes.

Notes from running Provean

Notes from work installing and running Provean to predict protein impact of variants.

Dissertation Defended

My dissertation defense on rapid adaptation in snakes has concluded!

Configuring JBrowse

Instructions for configuring JBrowse for viewing genome annotations

SRA Batch download

Tutorial on batch downloading NCBI SRA files using Bash.